RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33500.1 View Network Show in Genome Browser |
| Other Names | Os05g0404000 |
| Description | mTERF domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19678142-19680147 Nucleotide Length: 1527 |
| Protein-coding | LOC_Os05g33500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03660 LOC_Os05g01450 |
| Downstream Genes | LOC_Os07g24090 LOC_Os07g39430 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33500.1 |
| Rice Genome Annotation | LOC_Os05g33500.1 |
| Ricechip | LOC_Os05g33500.1 |
| KEGG | osa:4338743 dosa:Os05t0404000-01 |
| Entrez-Gene | 4338743 |