RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33510.1 View Network Show in Genome Browser |
| Other Names | Os05g0404200 |
| Description | peptide methionine sulfoxide reductase msrB, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19681732-19684599 Nucleotide Length: 690 |
| Protein-coding | LOC_Os05g33510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g04370 LOC_Os05g32310 LOC_Os02g37000 LOC_Os03g16210 LOC_Os01g47540 LOC_Os03g16220 LOC_Os04g32070 LOC_Os03g27310 LOC_Os03g61200 LOC_Os03g16230 LOC_Os03g06190 More.. |
| Downstream Genes | LOC_Os11g43900 LOC_Os08g36420 LOC_Os07g13280 LOC_Os06g38940 LOC_Os06g04030 LOC_Os06g40120 LOC_Os10g30100 LOC_Os07g32890 LOC_Os12g42980 LOC_Os12g02340 LOC_Os12g02310 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33510.1 |
| Rice Genome Annotation | LOC_Os05g33510.1 |
| Ricechip | LOC_Os05g33510.1 |
| KEGG | osa:4338744 dosa:Os05t0404200-01 |
| Entrez-Gene | 4338744 |