RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33520.1 View Network Show in Genome Browser |
| Other Names | Os05g0404400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19691343-19694288 Nucleotide Length: 720 |
| Protein-coding | LOC_Os05g33520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g45490 LOC_Os03g39830 LOC_Os02g02520 LOC_Os03g22160 LOC_Os03g48040 LOC_Os01g45750 LOC_Os02g55120 LOC_Os04g34460 LOC_Os02g49870 LOC_Os04g51792 LOC_Os01g69080 More.. |
| Downstream Genes | LOC_Os08g07060 LOC_Os09g36240 LOC_Os10g10170 LOC_Os07g28790 LOC_Os06g51290 LOC_Os11g04490 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33520.1 |
| Rice Genome Annotation | LOC_Os05g33520.1 |
| Ricechip | LOC_Os05g33520.1 |
| KEGG | osa:4338746 dosa:Os05t0404400-02 |
| Entrez-Gene | 4338746 |