RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33550.1 View Network Show in Genome Browser |
| Other Names | Os05g0404600 |
| Description | methyl-binding domain protein MBD, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19702753-19704966 Nucleotide Length: 558 |
| Protein-coding | LOC_Os05g33550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g30790 LOC_Os01g72310 LOC_Os02g09920 LOC_Os02g34850 LOC_Os02g47650 |
| Downstream Genes | LOC_Os12g42550 LOC_Os07g48200 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33550.1 |
| Rice Genome Annotation | LOC_Os05g33550.1 |
| Ricechip | LOC_Os05g33550.1 |
| KEGG | osa:4338748 dosa:Os05t0404600-01 |
| Entrez-Gene | 4338748 |