RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33570.1 View Network Show in Genome Browser |
| Other Names | Os05g0405000 |
| Description | pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19718506-19726410 Nucleotide Length: 2844 |
| Protein-coding | LOC_Os05g33570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18454 LOC_Os05g14010 |
| Downstream Genes | LOC_Os07g34640 LOC_Os06g01400 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00620 rn00710 rn01100 rn01120 |
| Metacyc Pathways | PWY-241 PWY-6549 PWY-6240 |
| Reference | |
|---|---|
| PubMed | 16596412 15941402 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33570.1 |
| Rice Genome Annotation | LOC_Os05g33570.1 |
| Ricechip | LOC_Os05g33570.1 |
| KEGG | osa:4338750 dosa:Os05t0405000-01 |
| Entrez-Gene | 4338750 |