RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33710.1 View Network Show in Genome Browser |
| Other Names | Os05g0407200 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19837789-19846592 Nucleotide Length: 1392 |
| Protein-coding | LOC_Os05g33710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g40940 LOC_Os01g51300 LOC_Os02g53140 LOC_Os04g44700 LOC_Os02g56880 LOC_Os05g16660 LOC_Os01g13730 |
| Downstream Genes | LOC_Os05g46570 LOC_Os08g04270 LOC_Os07g03160 LOC_Os07g12320 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1855 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33710.1 |
| Rice Genome Annotation | LOC_Os05g33710.1 |
| Ricechip | LOC_Os05g33710.1 |
| KEGG | osa:4338763 dosa:Os05t0407200-01 |
| Entrez-Gene | 4338763 |