RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33730.1 View Network Show in Genome Browser |
| Other Names | Os05g0407500 |
| Description | gibberellin receptor GID1L2, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19868419-19871283 Nucleotide Length: 1065 |
| Protein-coding | LOC_Os05g33730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g31490 LOC_Os03g49990 LOC_Os03g63660 LOC_Os03g41080 LOC_Os03g17660 LOC_Os01g24480 LOC_Os03g02640 LOC_Os03g14400 LOC_Os04g58330 LOC_Os04g44650 LOC_Os02g42570 More.. |
| Downstream Genes | LOC_Os12g44370 LOC_Os08g29780 LOC_Os07g06860 LOC_Os11g47730 LOC_Os12g01449 LOC_Os11g01439 LOC_Os09g39560 LOC_Os08g30930 LOC_Os10g41550 LOC_Os10g08474 LOC_Os10g08319 More.. |
| Reference | |
|---|---|
| PubMed | 21098733 20716699 16193045 17080612 17644730 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33730.1 |
| Rice Genome Annotation | LOC_Os05g33730.1 |
| Ricechip | LOC_Os05g33730.1 |
| KEGG | osa:4338764 dosa:Os05t0407500-01 |
| Entrez-Gene | 4338764 |