RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33940.1 View Network Show in Genome Browser |
| Other Names | Os05g0410200 |
| Description | alpha/beta hydrolase fold, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20037848-20039656 Nucleotide Length: 1089 |
| Protein-coding | LOC_Os05g33940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g16920 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g62230 LOC_Os01g61920 LOC_Os04g46910 LOC_Os02g45650 LOC_Os02g44470 |
| Downstream Genes | LOC_Os05g50270 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 LOC_Os12g43340 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1848 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33940.1 |
| Rice Genome Annotation | LOC_Os05g33940.1 |
| Ricechip | LOC_Os05g33940.1 |
| KEGG | osa:4338776 dosa:Os05t0410200-01 |
| Entrez-Gene | 4338776 |