RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g34030.1 View Network Show in Genome Browser |
| Other Names | Os05g0411100 |
| Description | peptide transporter PTR2, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20099150-20101168 Nucleotide Length: 1857 |
| Protein-coding | LOC_Os05g34030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56110 LOC_Os03g29350 LOC_Os03g56140 LOC_Os03g45170 LOC_Os04g01590 LOC_Os03g41390 LOC_Os03g51690 LOC_Os03g51710 LOC_Os01g19694 LOC_Os03g55540 LOC_Os05g03884 More.. |
| Downstream Genes | LOC_Os07g42280 LOC_Os12g39400 LOC_Os07g03770 LOC_Os10g30090 LOC_Os12g42850 LOC_Os09g39500 LOC_Os06g03540 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g34030.1 |
| Rice Genome Annotation | LOC_Os05g34030.1 |
| Ricechip | LOC_Os05g34030.1 |
| KEGG | dosa:Os05t0411100-00 |