RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g34170.2 View Network Show in Genome Browser |
| Other Names | Os05g0413200 |
| Description | tubulin/FtsZ domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20204127-20207554 Nucleotide Length: 1335 |
| Protein-coding | LOC_Os05g34170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51600 LOC_Os02g07490 LOC_Os03g11970 LOC_Os03g50510 LOC_Os03g44484 LOC_Os02g38920 LOC_Os03g38000 LOC_Os01g51380 LOC_Os01g38970 LOC_Os04g58110 LOC_Os05g22940 More.. |
| Downstream Genes | LOC_Os11g14220 LOC_Os07g38730 LOC_Os06g37180 LOC_Os11g04070 LOC_Os12g03880 LOC_Os08g03640 LOC_Os10g32550 LOC_Os06g45590 LOC_Os05g47980 LOC_Os12g25710 LOC_Os11g11390 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g34170.2 |
| Rice Genome Annotation | LOC_Os05g34170.2 |
| Ricechip | LOC_Os05g34170.2 |
| KEGG | osa:4338790 dosa:Os05t0413200-01 |
| Entrez-Gene | 4338790 |