RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g34240.3 View Network Show in Genome Browser |
| Other Names | Os05g0414400 |
| Description | hAT dimerisation domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20267699-20271119 Nucleotide Length: 1113 |
| Protein-coding | LOC_Os05g34240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18180 LOC_Os05g26840 LOC_Os01g57004 LOC_Os04g25410 LOC_Os03g03690 LOC_Os04g38520 LOC_Os04g43680 LOC_Os02g50810 LOC_Os03g42770 LOC_Os04g44400 LOC_Os01g32184 More.. |
| Downstream Genes | LOC_Os08g06530 LOC_Os11g37890 LOC_Os06g11320 LOC_Os12g29340 LOC_Os07g12640 LOC_Os08g01670 LOC_Os12g09000 LOC_Os07g41260 LOC_Os08g37650 LOC_Os05g39770 LOC_Os05g37434 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g34240.3 |
| Rice Genome Annotation | LOC_Os05g34240.3 |
| Ricechip | LOC_Os05g34240.3 |
| KEGG | osa:4338795 dosa:Os05t0414400-01 |
| Entrez-Gene | 4338795 |