RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g34540.1 View Network Show in Genome Browser |
| Other Names | Os05g0418000 |
| Description | rab GDP dissociation inhibitor alpha, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20477181-20483634 Nucleotide Length: 1338 |
| Protein-coding | LOC_Os05g34540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g09140 LOC_Os03g46390 LOC_Os01g37800 LOC_Os01g54590 LOC_Os01g12730 LOC_Os02g37420 LOC_Os03g60530 LOC_Os01g08450 LOC_Os02g43690 LOC_Os01g61170 LOC_Os03g62510 More.. |
| Downstream Genes | LOC_Os07g31370 LOC_Os12g43550 LOC_Os07g09680 LOC_Os06g35814 LOC_Os05g39670 LOC_Os05g44070 LOC_Os07g13530 LOC_Os09g15790 LOC_Os10g39620 LOC_Os05g48980 LOC_Os05g38630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g34540.1 |
| Rice Genome Annotation | LOC_Os05g34540.1 |
| Ricechip | LOC_Os05g34540.1 |
| KEGG | osa:4338812 dosa:Os05t0418000-01 |
| Entrez-Gene | 4338812 |