RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g34630.1 View Network Show in Genome Browser |
| Other Names | Os05g0419000 |
| Description | hydrolase, alpha/beta fold family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20536276-20539844 Nucleotide Length: 1212 |
| Protein-coding | LOC_Os05g34630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51010 LOC_Os01g49380 LOC_Os05g19150 LOC_Os03g27110 LOC_Os05g29974 LOC_Os02g11720 LOC_Os01g21560 LOC_Os01g66240 LOC_Os01g34480 LOC_Os03g60380 LOC_Os02g08420 More.. |
| Downstream Genes | LOC_Os07g42140 LOC_Os07g37840 LOC_Os07g42994 LOC_Os05g43830 LOC_Os12g16180 LOC_Os10g04620 LOC_Os11g25030 LOC_Os11g24450 LOC_Os09g34860 LOC_Os09g23150 LOC_Os07g41730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g34630.1 |
| Rice Genome Annotation | LOC_Os05g34630.1 |
| Ricechip | LOC_Os05g34630.1 |
| KEGG | osa:4338815 dosa:Os05t0419000-01 |
| Entrez-Gene | 4338815 |