RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g34670.1 View Network Show in Genome Browser |
| Other Names | Os05g0419500 |
| Description | KH domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20568919-20573667 Nucleotide Length: 876 |
| Protein-coding | LOC_Os05g34670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57640 LOC_Os03g25970 LOC_Os01g38620 LOC_Os04g42600 LOC_Os03g02420 LOC_Os01g57910 LOC_Os05g14860 LOC_Os02g03620 LOC_Os01g13100 LOC_Os01g13370 LOC_Os01g13470 More.. |
| Downstream Genes | LOC_Os06g23460 LOC_Os10g11034 LOC_Os10g41440 LOC_Os08g01930 LOC_Os08g10030 LOC_Os07g07310 LOC_Os12g18880 LOC_Os08g22354 LOC_Os08g01660 LOC_Os09g02700 LOC_Os08g04270 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g34670.1 |
| Rice Genome Annotation | LOC_Os05g34670.1 |
| Ricechip | LOC_Os05g34670.1 |
| KEGG | osa:4338818 dosa:Os05t0419500-01 |
| Entrez-Gene | 4338818 |