RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g34854.1 View Network Show in Genome Browser
Other Names	Os05g0421800,Os05g0421850,Os05g0421900
Description	gibberellin 20 oxidase 2, putative, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 20685346-20692274 Nucleotide Length: 1338
Protein-coding	LOC_Os05g34854

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005737	cytoplasm	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os05g34840 LOC_Os01g09300
Downstream Genes	LOC_Os09g07450 LOC_Os05g50090 LOC_Os06g07923

Pathways
KEGG Pathways	rn01110 rn00904 rn01100
Metacyc Pathways	PWY-5035

Database Links
Gramene	LOC_Os05g34854.1
Rice Genome Annotation	LOC_Os05g34854.1
Ricechip	LOC_Os05g34854.1
KEGG	osa:9266827 dosa:Os05t0421800-00 dosa:Os05t0421850-00 dosa:Os05t0421900-00