RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g34980.1 View Network Show in Genome Browser |
| Other Names | Os05g0424000 |
| Description | amino acid transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20779070-20781283 Nucleotide Length: 1491 |
| Protein-coding | LOC_Os05g34980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g47780 LOC_Os04g38680 LOC_Os03g14080 LOC_Os02g49510 LOC_Os03g12030 LOC_Os03g05310 LOC_Os01g49710 LOC_Os03g63700 LOC_Os03g31490 LOC_Os04g51330 LOC_Os04g57440 More.. |
| Downstream Genes | LOC_Os06g43700 LOC_Os06g24730 LOC_Os09g26880 LOC_Os12g32970 LOC_Os09g29460 LOC_Os10g25030 LOC_Os11g38650 LOC_Os08g42590 LOC_Os11g11100 LOC_Os08g13320 LOC_Os07g47540 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g34980.1 |
| Rice Genome Annotation | LOC_Os05g34980.1 |
| Ricechip | LOC_Os05g34980.1 |
| KEGG | osa:4338844 dosa:Os05t0424000-01 |
| Entrez-Gene | 4338844 |