RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g35050.1 View Network Show in Genome Browser |
| Other Names | Os05g0424700 |
| Description | ctr copper transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20804018-20804898 Nucleotide Length: 456 |
| Protein-coding | LOC_Os05g35050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g48410 LOC_Os01g70100 LOC_Os01g64810 LOC_Os01g43940 LOC_Os03g59290 LOC_Os04g50820 LOC_Os01g17160 LOC_Os03g54000 LOC_Os02g46850 |
| Downstream Genes | LOC_Os06g03540 LOC_Os09g33450 LOC_Os08g42620 LOC_Os06g03560 LOC_Os08g42370 LOC_Os06g03700 LOC_Os07g10600 LOC_Os11g32960 LOC_Os05g36090 LOC_Os12g03730 LOC_Os11g03910 More.. |
| Reference | |
|---|---|
| PubMed | 21510855 20852017 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g35050.1 |
| Rice Genome Annotation | LOC_Os05g35050.1 |
| Ricechip | LOC_Os05g35050.1 |
| KEGG | osa:4338846 dosa:Os05t0424700-01 |
| Entrez-Gene | 4338846 |