RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g35110.1 View Network Show in Genome Browser |
| Other Names | Os05g0425700 |
| Description | OsFBL22 - F-box domain and LRR containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20847172-20851097 Nucleotide Length: 1131 |
| Protein-coding | LOC_Os05g35110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g05700 LOC_Os03g05760 LOC_Os01g27150 LOC_Os02g56500 LOC_Os01g01450 LOC_Os03g62370 LOC_Os03g10860 LOC_Os04g57440 LOC_Os03g62340 |
| Downstream Genes | LOC_Os10g30420 LOC_Os07g32060 LOC_Os07g32020 LOC_Os07g32010 LOC_Os06g21380 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g35110.1 |
| Rice Genome Annotation | LOC_Os05g35110.1 |
| Ricechip | LOC_Os05g35110.1 |
| KEGG | osa:4338850 dosa:Os05t0425700-01 |
| Entrez-Gene | 4338850 |