RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g35274.5 View Network Show in Genome Browser |
| Other Names | Os05g0427300 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20949221-20951377 Nucleotide Length: 363 |
| Protein-coding | LOC_Os05g35274 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g35266 LOC_Os03g46770 LOC_Os05g13630 LOC_Os03g61990 LOC_Os04g50110 LOC_Os02g35950 LOC_Os04g37690 LOC_Os02g40900 LOC_Os01g56110 LOC_Os04g49440 LOC_Os01g68790 More.. |
| Downstream Genes | LOC_Os12g43600 LOC_Os10g17454 LOC_Os07g08960 LOC_Os11g40510 LOC_Os08g40880 LOC_Os11g41890 LOC_Os06g11730 LOC_Os08g04440 LOC_Os07g39560 LOC_Os06g37000 LOC_Os08g09350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g35274.5 |
| Rice Genome Annotation | LOC_Os05g35274.5 |
| Ricechip | LOC_Os05g35274.5 |
| KEGG | osa:4338860 dosa:Os05t0427300-03 |
| Entrez-Gene | 4338860 |