RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g35360.1 View Network Show in Genome Browser |
| Other Names | Os05g0428100 |
| Description | beta-galactosidase 7 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20989529-20998312 Nucleotide Length: 2328 |
| Protein-coding | LOC_Os05g35360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g60810 LOC_Os02g32340 |
| Downstream Genes | LOC_Os05g39950 LOC_Os12g41290 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn00531 rn00604 rn01100 rn00511 rn00600 |
| Metacyc Pathways | LACTOSEUTIL-PWY BGALACT-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g35360.1 |
| Rice Genome Annotation | LOC_Os05g35360.1 |
| Ricechip | LOC_Os05g35360.1 |
| KEGG | osa:9270707 dosa:Os05t0428100-00 |
| Entrez-Gene | 9270707 |