RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g35460.1 View Network Show in Genome Browser |
| Other Names | Os05g0429400 |
| Description | patellin protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 21065431-21068427 Nucleotide Length: 1758 |
| Protein-coding | LOC_Os05g35460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g11950 LOC_Os05g24020 LOC_Os03g53310 LOC_Os03g51430 LOC_Os01g19820 LOC_Os03g60710 LOC_Os03g53230 LOC_Os04g02780 LOC_Os03g51030 LOC_Os03g18890 LOC_Os04g53740 More.. |
| Downstream Genes | LOC_Os08g42050 LOC_Os07g43890 LOC_Os06g10760 LOC_Os11g44810 LOC_Os09g31970 LOC_Os08g40180 LOC_Os09g36520 LOC_Os11g47730 LOC_Os06g14530 LOC_Os06g24540 LOC_Os12g43660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g35460.1 |
| Rice Genome Annotation | LOC_Os05g35460.1 |
| Ricechip | LOC_Os05g35460.1 |
| KEGG | osa:4338870 dosa:Os05t0429400-01 |
| Entrez-Gene | 4338870 |