RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g35480.1 View Network Show in Genome Browser |
| Other Names | Os05g0429700 |
| Description | anthranilate phosphoribosyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 21080988-21084058 Nucleotide Length: 2415 |
| Protein-coding | LOC_Os05g35480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32760 LOC_Os04g38310 LOC_Os03g18010 LOC_Os02g10630 LOC_Os05g03610 LOC_Os04g40070 |
| Downstream Genes | LOC_Os11g05010 LOC_Os07g49330 LOC_Os06g19400 LOC_Os06g40570 LOC_Os12g37560 LOC_Os08g38440 LOC_Os07g31300 LOC_Os06g47600 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1427 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g35480.1 |
| Rice Genome Annotation | LOC_Os05g35480.1 |
| Ricechip | LOC_Os05g35480.1 |
| KEGG | osa:4338873 dosa:Os05t0429700-01 |
| Entrez-Gene | 4338873 |