RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g35500.1 View Network Show in Genome Browser
Other Names	Os05g0429900
Description	MYB family transcription factor, putative, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 21099294-21100588 Nucleotide Length: 783
Protein-coding	LOC_Os05g35500

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0019748	secondary metabolic process	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g16650 LOC_Os02g06640 LOC_Os03g52840 LOC_Os02g32350 LOC_Os03g41100 LOC_Os03g02680 LOC_Os04g53620 LOC_Os03g01850
Downstream Genes	LOC_Os06g47840 LOC_Os08g42600 LOC_Os12g39210 LOC_Os12g31810 LOC_Os07g23110 LOC_Os07g32390 LOC_Os11g32900 LOC_Os11g29380

Reference
PubMed	9370307

Database Links
Gramene	LOC_Os05g35500.1
Rice Genome Annotation	LOC_Os05g35500.1
Ricechip	LOC_Os05g35500.1
KEGG	osa:9266213 dosa:Os05t0429900-01
Entrez-Gene	9266213