RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g35540.1 View Network Show in Genome Browser |
| Other Names | Os05g0430400 |
| Description | GTPase of unknown function domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 21126019-21129645 Nucleotide Length: 1116 |
| Protein-coding | LOC_Os05g35540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51840 LOC_Os05g28940 LOC_Os03g45400 LOC_Os02g02390 LOC_Os01g53150 LOC_Os03g56840 LOC_Os03g60180 LOC_Os02g51570 LOC_Os03g52640 LOC_Os04g47020 LOC_Os01g72800 More.. |
| Downstream Genes | LOC_Os11g41910 LOC_Os07g47300 LOC_Os11g38020 LOC_Os05g49220 LOC_Os11g47800 LOC_Os07g43470 LOC_Os08g09940 LOC_Os06g30380 LOC_Os08g29110 LOC_Os07g38300 LOC_Os11g38030 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g35540.1 |
| Rice Genome Annotation | LOC_Os05g35540.1 |
| Ricechip | LOC_Os05g35540.1 |
| KEGG | osa:4338877 dosa:Os05t0430400-01 |
| Entrez-Gene | 4338877 |