RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g36000.1 View Network Show in Genome Browser |
| Other Names | Os05g0435700 |
| Description | FabA-like domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 21322822-21325176 Nucleotide Length: 648 |
| Protein-coding | LOC_Os05g36000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52400 LOC_Os01g54900 LOC_Os02g10260 LOC_Os03g38230 LOC_Os01g63830 LOC_Os04g41300 LOC_Os02g03460 LOC_Os02g52420 LOC_Os04g52100 LOC_Os02g24612 LOC_Os01g55360 More.. |
| Downstream Genes | LOC_Os07g04200 LOC_Os12g35630 LOC_Os08g25290 LOC_Os06g07120 LOC_Os11g05570 LOC_Os07g38300 LOC_Os07g25410 LOC_Os10g36470 LOC_Os05g39390 LOC_Os07g41680 LOC_Os07g32590 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00061 rn01040 |
| Metacyc Pathways | PWY-5061 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g36000.1 |
| Rice Genome Annotation | LOC_Os05g36000.1 |
| Ricechip | LOC_Os05g36000.1 |
| KEGG | osa:4338898 dosa:Os05t0435700-01 |
| Entrez-Gene | 4338898 |