RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g36070.2 View Network Show in Genome Browser |
| Other Names | Os05g0436400 |
| Description | signal peptide peptidase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 21370159-21376605 Nucleotide Length: 1032 |
| Protein-coding | LOC_Os05g36070 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g23720 LOC_Os05g06440 LOC_Os01g38510 LOC_Os02g48110 LOC_Os03g05520 LOC_Os04g51610 LOC_Os02g08180 LOC_Os02g02410 LOC_Os02g40830 LOC_Os01g16930 LOC_Os01g68324 More.. |
| Downstream Genes | LOC_Os11g09280 LOC_Os08g17680 LOC_Os07g06590 LOC_Os09g19734 LOC_Os06g49480 LOC_Os06g39260 LOC_Os06g05740 LOC_Os09g07510 LOC_Os05g44360 LOC_Os10g37630 LOC_Os07g14270 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g36070.2 |
| Rice Genome Annotation | LOC_Os05g36070.2 |
| Ricechip | LOC_Os05g36070.2 |
| KEGG | osa:4338901 dosa:Os05t0436400-03 |
| Entrez-Gene | 4338901 |