RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g36260.1 View Network Show in Genome Browser |
| Other Names | Os05g0438500 |
| Description | soluble inorganic pyrophosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 21491660-21493705 Nucleotide Length: 675 |
| Protein-coding | LOC_Os05g36260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g08950 LOC_Os04g09720 |
| Downstream Genes | LOC_Os06g08154 LOC_Os11g27329 LOC_Os11g27264 LOC_Os10g01110 LOC_Os08g44210 LOC_Os12g28177 LOC_Os12g28137 |
| Pathways | |
|---|---|
| Metacyc Pathways | P61-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g36260.1 |
| Rice Genome Annotation | LOC_Os05g36260.1 |
| Ricechip | LOC_Os05g36260.1 |
| KEGG | osa:4338911 dosa:Os05t0438500-01 |
| Entrez-Gene | 4338911 |