RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g37060.1 View Network Show in Genome Browser |
| Other Names | Os05g0442400 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 21654182-21655380 Nucleotide Length: 549 |
| Protein-coding | LOC_Os05g37060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18030 LOC_Os01g41370 LOC_Os02g28580 LOC_Os02g15150 LOC_Os02g36680 |
| Downstream Genes | LOC_Os06g12450 LOC_Os07g11630 LOC_Os09g06950 LOC_Os07g11380 LOC_Os07g11360 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g37060.1 |
| Rice Genome Annotation | LOC_Os05g37060.1 |
| Ricechip | LOC_Os05g37060.1 |
| KEGG | osa:4338925 dosa:Os05t0442400-01 |
| Entrez-Gene | 4338925 |