RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g38150.1 View Network Show in Genome Browser |
| Other Names | Os05g0455500 |
| Description | amino acid kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22374029-22381039 Nucleotide Length: 2151 |
| Protein-coding | LOC_Os05g38150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55890 LOC_Os04g46460 LOC_Os04g33300 LOC_Os03g58540 LOC_Os01g71990 LOC_Os04g51786 LOC_Os03g52840 LOC_Os02g07760 LOC_Os03g31690 LOC_Os03g48140 LOC_Os04g25540 More.. |
| Downstream Genes | LOC_Os09g32030 LOC_Os12g13824 LOC_Os07g23110 LOC_Os07g47300 LOC_Os10g32550 LOC_Os06g46310 LOC_Os06g15990 LOC_Os05g39240 LOC_Os11g03430 LOC_Os12g03130 LOC_Os12g13320 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00330 rn01100 |
| Metacyc Pathways | PROSYN-PWY PROLINE-SYN2-PWY CITRULBIO-PWY |
| Reference | |
|---|---|
| PubMed | 9106509 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g38150.1 |
| Rice Genome Annotation | LOC_Os05g38150.1 |
| Ricechip | LOC_Os05g38150.1 |
| KEGG | osa:4338979 dosa:Os05t0455500-02 |
| Entrez-Gene | 4338979 |