RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g38360.2 View Network Show in Genome Browser |
| Other Names | Os05g0458000 |
| Description | DHHC zinc finger domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22488569-22492094 Nucleotide Length: 852 |
| Protein-coding | LOC_Os05g38360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g12740 LOC_Os02g40870 LOC_Os02g51150 LOC_Os01g55040 LOC_Os03g03610 LOC_Os02g14900 LOC_Os02g58560 |
| Downstream Genes | LOC_Os09g20090 LOC_Os06g37080 LOC_Os11g48020 LOC_Os07g01150 LOC_Os06g12250 LOC_Os07g10830 LOC_Os06g08380 LOC_Os09g32952 LOC_Os06g37150 LOC_Os07g43460 LOC_Os06g51270 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g38360.2 |
| Rice Genome Annotation | LOC_Os05g38360.2 |
| Ricechip | LOC_Os05g38360.2 |
| KEGG | osa:4338999 dosa:Os05t0458000-01 |
| Entrez-Gene | 4338999 |