RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g38370.2 View Network Show in Genome Browser |
| Other Names | Os05g0458100 |
| Description | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22492398-22495011 Nucleotide Length: 420 |
| Protein-coding | LOC_Os05g38370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02550 LOC_Os03g50080 LOC_Os02g58020 LOC_Os03g32630 LOC_Os02g51570 LOC_Os04g56330 LOC_Os02g37309 |
| Downstream Genes | LOC_Os07g30800 LOC_Os07g04160 LOC_Os06g20320 LOC_Os08g45010 LOC_Os09g39910 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g38370.2 |
| Rice Genome Annotation | LOC_Os05g38370.2 |
| Ricechip | LOC_Os05g38370.2 |
| KEGG | osa:4339000 dosa:Os05t0458100-01 |
| Entrez-Gene | 4339000 |