RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g38400.2 View Network Show in Genome Browser |
| Other Names | Os05g0458400 |
| Description | OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22518317-22524148 Nucleotide Length: 2004 |
| Protein-coding | LOC_Os05g38400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g39260 LOC_Os02g56000 LOC_Os02g16670 LOC_Os01g39250 LOC_Os03g57870 LOC_Os03g02480 LOC_Os02g37000 LOC_Os02g11050 LOC_Os03g19350 LOC_Os02g19150 LOC_Os01g66330 More.. |
| Downstream Genes | LOC_Os07g42632 LOC_Os08g16480 LOC_Os06g07630 LOC_Os05g44310 LOC_Os06g03940 LOC_Os07g15880 LOC_Os06g45980 LOC_Os11g20790 LOC_Os06g49140 LOC_Os05g49230 LOC_Os09g27270 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g38400.2 |
| Rice Genome Annotation | LOC_Os05g38400.2 |
| Ricechip | LOC_Os05g38400.2 |
| KEGG | osa:4339002 dosa:Os05t0458400-01 |
| Entrez-Gene | 4339002 |