RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g38580.2 View Network Show in Genome Browser |
| Other Names | Os05g0460700 |
| Description | 50S ribosomal protein L17, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22630314-22632494 Nucleotide Length: 486 |
| Protein-coding | LOC_Os05g38580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g54040 LOC_Os03g24020 LOC_Os03g03360 LOC_Os03g49710 LOC_Os01g42640 LOC_Os03g26860 LOC_Os02g06700 LOC_Os02g33140 LOC_Os01g14830 LOC_Os03g58050 LOC_Os03g59720 More.. |
| Downstream Genes | LOC_Os12g42180 LOC_Os09g19954 LOC_Os08g21840 LOC_Os06g39700 LOC_Os09g07910 LOC_Os08g15460 LOC_Os07g07709 LOC_Os07g07719 LOC_Os06g46930 LOC_Os09g17840 LOC_Os09g17830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g38580.2 |
| Rice Genome Annotation | LOC_Os05g38580.2 |
| Ricechip | LOC_Os05g38580.2 |
| KEGG | osa:4339018 dosa:Os05t0460700-01 |
| Entrez-Gene | 4339018 |