RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g38710.1 View Network Show in Genome Browser |
| Other Names | Os05g0462301,Os05g0462400 |
| Description | lipin, N-terminal conserved region family protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22706549-22713940 Nucleotide Length: 3081 |
| Protein-coding | LOC_Os05g38710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17800 LOC_Os02g30630 LOC_Os04g48410 LOC_Os03g63300 LOC_Os01g47540 LOC_Os02g10070 LOC_Os04g32010 LOC_Os03g31550 LOC_Os02g33450 LOC_Os04g31960 LOC_Os04g46450 More.. |
| Downstream Genes | LOC_Os07g10690 LOC_Os10g10244 LOC_Os11g42420 LOC_Os09g39590 LOC_Os11g33240 LOC_Os07g07240 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1426 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g38710.1 |
| Rice Genome Annotation | LOC_Os05g38710.1 |
| Ricechip | LOC_Os05g38710.1 |
| KEGG | osa:4339026 dosa:Os05t0462301-00dosa:Os05t0462400-01 |