RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g38730.1 View Network Show in Genome Browser |
| Other Names | Os05g0462600 |
| Description | SAC3/GANP family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22725527-22734013 Nucleotide Length: 2550 |
| Protein-coding | LOC_Os05g38730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22870 LOC_Os04g58830 LOC_Os03g08450 LOC_Os01g33030 LOC_Os01g61830 LOC_Os03g17700 LOC_Os02g37870 LOC_Os03g29470 LOC_Os05g08360 LOC_Os02g57590 LOC_Os01g10280 More.. |
| Downstream Genes | LOC_Os07g25420 LOC_Os09g21760 LOC_Os07g13280 LOC_Os09g02810 LOC_Os06g06090 LOC_Os05g41100 LOC_Os06g04970 LOC_Os10g38950 LOC_Os08g06060 LOC_Os07g29320 LOC_Os07g45160 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g38730.1 |
| Rice Genome Annotation | LOC_Os05g38730.1 |
| Ricechip | LOC_Os05g38730.1 |
| KEGG | osa:9270017 dosa:Os05t0462600-01 |
| Entrez-Gene | 9270017 |