RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g38810.1 View Network Show in Genome Browser |
| Other Names | Os05g0463600,Os05g0463500 |
| Description | PWWP domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22764442-22769335 Nucleotide Length: 4239 |
| Protein-coding | LOC_Os05g38810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g24339 LOC_Os01g54100 LOC_Os03g05690 LOC_Os04g42320 LOC_Os01g64560 LOC_Os02g30620 LOC_Os02g47900 LOC_Os04g30910 LOC_Os03g36110 LOC_Os03g63580 |
| Downstream Genes | LOC_Os07g46180 LOC_Os09g04890 LOC_Os05g50480 LOC_Os08g12430 LOC_Os07g22220 LOC_Os08g07960 LOC_Os09g03600 LOC_Os11g38900 LOC_Os08g39070 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g38810.1 |
| Rice Genome Annotation | LOC_Os05g38810.1 |
| Ricechip | LOC_Os05g38810.1 |
| KEGG | osa:4339034 osa:4339033 dosa:Os05t0463600-01dosa:Os05t0463500-01 |
| Entrez-Gene | 4339034 |