RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g38830.1 View Network Show in Genome Browser |
| Other Names | Os05g0463900 |
| Description | HECT-domain domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22776036-22779105 Nucleotide Length: 1575 |
| Protein-coding | LOC_Os05g38830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g32330 LOC_Os02g31040 LOC_Os01g60410 LOC_Os01g60360 LOC_Os02g11050 |
| Downstream Genes | LOC_Os07g49270 LOC_Os08g01920 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g38830.1 |
| Rice Genome Annotation | LOC_Os05g38830.1 |
| Ricechip | LOC_Os05g38830.1 |
| KEGG | osa:4339037 dosa:Os05t0463900-01 |
| Entrez-Gene | 4339037 |