RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g38980.1 View Network Show in Genome Browser |
| Other Names | Os05g0465800 |
| Description | respiratory burst oxidase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22860152-22865186 Nucleotide Length: 2460 |
| Protein-coding | LOC_Os05g38980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53130 LOC_Os01g53250 LOC_Os04g55960 |
| Downstream Genes | LOC_Os08g36500 LOC_Os08g36480 LOC_Os09g38620 LOC_Os08g14570 |
| Reference | |
|---|---|
| PubMed | 22448275 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g38980.1 |
| Rice Genome Annotation | LOC_Os05g38980.1 |
| Ricechip | LOC_Os05g38980.1 |
| KEGG | osa:4339045 dosa:Os05t0465800-01 |
| Entrez-Gene | 4339045 |