RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g39090.1 View Network Show in Genome Browser |
| Other Names | Os05g0467000 |
| Description | CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22919309-22924421 Nucleotide Length: 1644 |
| Protein-coding | LOC_Os05g39090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51010 LOC_Os02g35010 LOC_Os05g26890 LOC_Os03g25070 LOC_Os03g17700 LOC_Os01g39770 LOC_Os02g14840 LOC_Os01g55200 LOC_Os01g48680 LOC_Os01g51200 LOC_Os03g20370 More.. |
| Downstream Genes | LOC_Os12g12860 LOC_Os07g44710 LOC_Os07g32380 LOC_Os06g06090 LOC_Os10g23090 LOC_Os05g43570 LOC_Os07g48780 LOC_Os05g41210 LOC_Os06g48300 LOC_Os09g10720 LOC_Os07g07910 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2093-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g39090.1 |
| Rice Genome Annotation | LOC_Os05g39090.1 |
| Ricechip | LOC_Os05g39090.1 |
| KEGG | osa:4339053 dosa:Os05t0467000-01 |
| Entrez-Gene | 4339053 |