RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g39230.1 View Network Show in Genome Browser |
| Other Names | Os05g0468600 |
| Description | low photochemical bleaching 1 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 22996896-23005544 Nucleotide Length: 2601 |
| Protein-coding | LOC_Os05g39230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g58450 LOC_Os02g33500 LOC_Os01g37820 LOC_Os01g48690 LOC_Os03g52640 LOC_Os05g19380 LOC_Os02g07230 |
| Downstream Genes | LOC_Os08g15460 LOC_Os06g22690 LOC_Os12g01220 LOC_Os12g01210 LOC_Os11g01220 LOC_Os11g01210 LOC_Os09g32030 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g39230.1 |
| Rice Genome Annotation | LOC_Os05g39230.1 |
| Ricechip | LOC_Os05g39230.1 |
| KEGG | osa:4339063 dosa:Os05t0468600-00 |
| Entrez-Gene | 4339063 |