RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g39530.2 View Network Show in Genome Browser |
| Other Names | Os05g0472300 |
| Description | ribonuclease P family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23196137-23201465 Nucleotide Length: 945 |
| Protein-coding | LOC_Os05g39530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g22870 LOC_Os04g34940 LOC_Os05g18780 LOC_Os03g06980 LOC_Os03g52490 LOC_Os03g13760 LOC_Os02g01250 |
| Downstream Genes | LOC_Os11g06760 LOC_Os12g01060 LOC_Os11g01074 LOC_Os09g37006 LOC_Os12g07680 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g39530.2 |
| Rice Genome Annotation | LOC_Os05g39530.2 |
| Ricechip | LOC_Os05g39530.2 |
| KEGG | osa:4339079 dosa:Os05t0472300-01 |
| Entrez-Gene | 4339079 |