RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g39670.1 View Network Show in Genome Browser |
| Other Names | Os05g0474400 |
| Description | prenylated rab acceptor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23284633-23285757 Nucleotide Length: 663 |
| Protein-coding | LOC_Os05g39670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12730 LOC_Os03g55070 LOC_Os02g55440 LOC_Os05g34540 LOC_Os05g38160 LOC_Os01g25540 LOC_Os05g23860 LOC_Os02g43690 LOC_Os01g08450 LOC_Os01g62890 LOC_Os03g46390 More.. |
| Downstream Genes | LOC_Os05g44050 LOC_Os09g04880 LOC_Os07g31370 LOC_Os12g43550 LOC_Os07g16970 LOC_Os05g41480 LOC_Os12g03990 LOC_Os11g04180 LOC_Os11g07280 LOC_Os06g44374 LOC_Os06g09630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g39670.1 |
| Rice Genome Annotation | LOC_Os05g39670.1 |
| Ricechip | LOC_Os05g39670.1 |
| KEGG | osa:4339088 dosa:Os05t0474400-01 |
| Entrez-Gene | 4339088 |