RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g39680.1 View Network Show in Genome Browser |
| Other Names | Os05g0474500,Os05g0474600 |
| Description | PX domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23287870-23297397 Nucleotide Length: 3768 |
| Protein-coding | LOC_Os05g39680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35190 |
| Downstream Genes | LOC_Os05g39690 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g39680.1 |
| Rice Genome Annotation | LOC_Os05g39680.1 |
| Ricechip | LOC_Os05g39680.1 |
| KEGG | osa:4339089 osa:4339090 dosa:Os05t0474500-01dosa:Os05t0474600-02 |
| Entrez-Gene | 4339089 |