RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g39730.1 View Network Show in Genome Browser |
| Other Names | Os05g0474900 |
| Description | SAG20, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23317204-23320033 Nucleotide Length: 1665 |
| Protein-coding | LOC_Os05g39730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g06120 LOC_Os03g03180 LOC_Os02g36940 LOC_Os01g06460 LOC_Os02g36950 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g39730.1 |
| Rice Genome Annotation | LOC_Os05g39730.1 |
| Ricechip | LOC_Os05g39730.1 |
| KEGG | osa:4339093 dosa:Os05t0474900-01 |
| Entrez-Gene | 4339093 |