RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g39930.1 View Network Show in Genome Browser |
| Other Names | Os05g0476700 |
| Description | spotted leaf 11, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23463230-23465862 Nucleotide Length: 2034 |
| Protein-coding | LOC_Os05g39930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05750 LOC_Os04g58850 LOC_Os04g59494 LOC_Os02g52370 LOC_Os01g70790 LOC_Os05g28510 LOC_Os03g18350 |
| Downstream Genes | LOC_Os06g46950 LOC_Os12g38110 LOC_Os12g05440 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g39930.1 |
| Rice Genome Annotation | LOC_Os05g39930.1 |
| Ricechip | LOC_Os05g39930.1 |
| KEGG | osa:4339101 dosa:Os05t0476700-01 |
| Entrez-Gene | 4339101 |