RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g39990.1 View Network Show in Genome Browser |
| Other Names | Os05g0477600 |
| Description | expansin precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23495606-23497572 Nucleotide Length: 741 |
| Protein-coding | LOC_Os05g39990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12070 LOC_Os01g12200 |
| Downstream Genes | LOC_Os09g29710 LOC_Os09g29690 LOC_Os06g33570 LOC_Os11g34940 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g39990.1 |
| Rice Genome Annotation | LOC_Os05g39990.1 |
| Ricechip | LOC_Os05g39990.1 |
| KEGG | osa:4339106 dosa:Os05t0477600-01 |
| Entrez-Gene | 4339106 |