RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g40020.1 View Network Show in Genome Browser |
| Other Names | Os05g0478000 |
| Description | RING-H2 finger protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23510183-23511071 Nucleotide Length: 570 |
| Protein-coding | LOC_Os05g40020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g03100 LOC_Os03g06350 |
| Downstream Genes | LOC_Os08g01920 LOC_Os09g07900 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g40020.1 |
| Rice Genome Annotation | LOC_Os05g40020.1 |
| Ricechip | LOC_Os05g40020.1 |
| KEGG | osa:4339109 dosa:Os05t0478000-01 |
| Entrez-Gene | 4339109 |