RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g40260.1 View Network Show in Genome Browser |
| Other Names | Os05g0481000 |
| Description | acetyltransferase, GNAT family, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23642766-23646937 Nucleotide Length: 765 |
| Protein-coding | LOC_Os05g40260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32180 LOC_Os04g54330 LOC_Os03g58010 LOC_Os03g55530 LOC_Os03g49230 LOC_Os03g46200 LOC_Os03g07990 LOC_Os03g05710 LOC_Os02g56219 LOC_Os02g46700 LOC_Os01g42470 More.. |
| Downstream Genes | LOC_Os10g35680 LOC_Os09g31310 LOC_Os09g17850 LOC_Os10g28040 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 |
| Metacyc Pathways | PWY-84 PWY-5080 PWY-5307 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g40260.1 |
| Rice Genome Annotation | LOC_Os05g40260.1 |
| Ricechip | LOC_Os05g40260.1 |
| KEGG | osa:4339123 dosa:Os05t0481000-01 |
| Entrez-Gene | 4339123 |