RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g40290.1 View Network Show in Genome Browser |
| Other Names | Os05g0481500 |
| Description | KH domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23672748-23677330 Nucleotide Length: 849 |
| Protein-coding | LOC_Os05g40290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02420 LOC_Os02g19860 LOC_Os05g07050 LOC_Os02g57640 LOC_Os01g57910 LOC_Os04g42600 LOC_Os01g51620 LOC_Os01g13100 LOC_Os01g13470 LOC_Os01g45730 LOC_Os01g13090 More.. |
| Downstream Genes | LOC_Os10g11034 LOC_Os08g18150 LOC_Os10g34380 LOC_Os10g31520 LOC_Os08g03390 LOC_Os10g29560 LOC_Os12g18880 LOC_Os08g22354 LOC_Os08g01660 LOC_Os09g02700 LOC_Os08g04270 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g40290.1 |
| Rice Genome Annotation | LOC_Os05g40290.1 |
| Ricechip | LOC_Os05g40290.1 |
| KEGG | osa:4339126 dosa:Os05t0481500-01 |
| Entrez-Gene | 4339126 |