RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g40700.1 View Network Show in Genome Browser |
| Other Names | Os05g0485300 |
| Description | transmembrane protein 56, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23865753-23869534 Nucleotide Length: 792 |
| Protein-coding | LOC_Os05g40700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64930 LOC_Os03g15750 LOC_Os02g49590 LOC_Os02g37080 LOC_Os02g40000 LOC_Os04g42500 |
| Downstream Genes | LOC_Os09g20630 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1425-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g40700.1 |
| Rice Genome Annotation | LOC_Os05g40700.1 |
| Ricechip | LOC_Os05g40700.1 |
| KEGG | osa:4339138 dosa:Os05t0485300-01 |
| Entrez-Gene | 4339138 |